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IPPS
2009
IEEE
15 years 7 months ago
Dynamic parallelization for RNA structure comparison
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Eric Snow, Eric Aubanel, Patricia Evans
IPPS
2009
IEEE
15 years 7 months ago
GenWrapper: A generic wrapper for running legacy applications on desktop grids
Desktop Grids represent an alternative trend in Grid computing using the same software infrastructure as Volunteer Computing projects, such as BOINC. Applications to be deployed o...
Csaba Attila Marosi, Zoltán Balaton, P&eacu...
IPPS
2009
IEEE
15 years 7 months ago
A cross-input adaptive framework for GPU program optimizations
Abstract—Recent years have seen a trend in using graphic processing units (GPU) as accelerators for general-purpose computing. The inexpensive, single-chip, massively parallel ar...
Yixun Liu, Eddy Z. Zhang, Xipeng Shen
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IPPS
2009
IEEE
15 years 7 months ago
Power-aware dynamic task scheduling for heterogeneous accelerated clusters
Recent accelerators such as GPUs achieve better cost-performance and watt-performance ratio, while the range of their application is more limited than general CPUs. Thus heterogen...
Tomoaki Hamano, Toshio Endo, Satoshi Matsuoka
IPPS
2009
IEEE
15 years 7 months ago
A fusion-based approach for tolerating faults in finite state machines
Given a set of n different deterministic finite state machines (DFSMs) modeling a distributed system, we examine the problem of tolerating f crash or Byzantine faults in such a ...
Vinit A. Ogale, Bharath Balasubramanian, Vijay K. ...