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IPPS
2009
IEEE
15 years 4 months ago
Energy minimization for periodic real-time tasks on heterogeneous processing units
Adopting multiple processing units to enhance the computing capability or reduce the power consumption has been widely accepted for designing modern computing systems. Such confi...
Jian-Jia Chen, Andreas Schranzhofer, Lothar Thiele
IPPS
2009
IEEE
15 years 4 months ago
Toward adjoinable MPI
4 Automatic differentiation is the primary means of obtaining analytic5 derivatives from a numerical model given as a computer program. There-6 fore, it is an essential productivi...
Jean Utke, Laurent Hascoët, Patrick Heimbach,...
IPPS
2009
IEEE
15 years 4 months ago
High-throughput protein structure determination using grid computing
Determining the X-ray crystallographic structures of proteins using the technique of molecular replacement (MR) can be a time and labor-intensive trial-and-error process, involvin...
Jason W. Schmidberger, Blair Bethwaite, Colin Enti...
IPPS
2009
IEEE
15 years 4 months ago
Multi-dimensional characterization of temporal data mining on graphics processors
Through the algorthmic design patterns of data parallelism and task parallelism, the graphics processing unit (GPU) offers the potential to vastly accelerate discovery and innovat...
Jeremy S. Archuleta, Yong Cao, Thomas Scogland, Wu...
IPPS
2009
IEEE
15 years 4 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell