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ISMB
1994
14 years 10 months ago
A Restriction Mapping Engine Using Constraint Logic Programming
Restrictionmappinggenerallyrequires the applicationof information from various digestions by restriction enzymesto find solution sets. Weuse boththe predicate calculusandconstrain...
Trevor I. Dix, Chut N. Yee
ISMB
1994
14 years 10 months ago
Neural Networks for Determining Protein Specificity and Multiple Alignment of Binding Sites
Weuse a quantitative definition of specificity to developa neural networkfor the identification of commonprotein binding sites in a collection of unaligned DNAfragments. Wedemonst...
John M. Heumann, Alan S. Lapedes, Gary D. Stormo
ISMB
1994
14 years 10 months ago
An Efficient Method for Multiple Sequence Alignment
Multiple sequence alignment has been a useful methodin the study of molecular evolution and sequence-structure relationships. This paper presents a newmethodfor multiple sequence ...
Jin Kim, Sakti Pramanik
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ISMB
1994
14 years 10 months ago
Using Interval Logic for Order Assembly
Temporallogic, in particular, interval logic has been used to represent genomemapsand to assist genome mapconstructions. However,interval logic itself appears to be bruited in its...
Zhan Cui
ISMB
1994
14 years 10 months ago
Genetic Map Construction with Constraints
Apilot program,CME,is describedfor generatinga physical genetic mapfromhybridization fingerprintingdata. CMEis implementedin the parallel constraint logic programming language Eli...
Dominic A. Clark, Christopher J. Rawlings, Sylvie ...