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NAR
2008
90views more  NAR 2008»
14 years 9 months ago
Many Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata
Many Microbe Microarrays Database (M3D ) is designed to facilitate the analysis and visualization of expression data in compendia compiled from multiple laboratories. M3D contains...
Jeremiah J. Faith, Michael E. Driscoll, Vincent A....
NAR
2008
122views more  NAR 2008»
14 years 9 months ago
SIMAP - structuring the network of protein similarities
Protein sequences are the most important source of evolutionary and functional information for new proteins. In order to facilitate the computationally intensive tasks of sequence...
Thomas Rattei, Patrick Tischler, Roland Arnold, Fr...
NAR
2008
119views more  NAR 2008»
14 years 9 months ago
MALISAM: a database of structurally analogous motifs in proteins
MALISAM (manual alignments for structurally analogous motifs) represents the first database containing pairs of structural analogs and their alignments. To find reliable analogs, ...
Hua Cheng, Bong-Hyun Kim, Nick V. Grishin
NAR
2008
107views more  NAR 2008»
14 years 9 months ago
MutDB: update on development of tools for the biochemical analysis of genetic variation
Understanding how genetic variation affects the molecular function of gene products is an emergent area of bioinformatic research. Here, we present updates to MutDB (http://www.mu...
Arti Singh, Adebayo Olowoyeye, Peter H. Baenziger,...
NAR
2008
67views more  NAR 2008»
14 years 9 months ago
EpiToolKit - a web server for computational immunomics
Predicting the T-cell-mediated immune response is an important task in vaccine design and thus one of the key problems in computational immunomics. Various methods have been devel...
Magdalena Feldhahn, Philipp Thiel, Mathias M. Schu...