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APBC
2004
122views Bioinformatics» more  APBC 2004»
14 years 11 months ago
Integrating Biopathway Databases for Large-scale Modeling and Simulation
Biopathway databases have been developed, such as KEGG and EcoCyc, that compile interaction structures of biopathways together with biological annotations. However, these biopathw...
Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, Sato...
APBC
2004
173views Bioinformatics» more  APBC 2004»
14 years 11 months ago
RNA Secondary Structure Prediction with Simple Pseudoknots
Pseudoknots are widely occurring structural motifs in RNA. Pseudoknots have been shown to be functionally important in different RNAs which play regulatory, catalytic, or structur...
Jitender S. Deogun, Ruben Donts, Olga Komina, Fang...
APBC
2004
123views Bioinformatics» more  APBC 2004»
14 years 11 months ago
Empirical Knowledge and Genetic Algorithms for Selection of Amide I Frequencies in Protein Secondary Structure Prediction
Here we investigate an extension of a previously suggested "automatic amide I frequency selection procedure" where we introduce an additional criterion utilizing empiric...
Joachim A. Hering, Peter R. Innocent, Parvez I. Ha...
CLIMA
2004
14 years 11 months ago
A New Framework for Knowledge Revision of Abductive Agents Through Their Interaction
The aim of this work is the design of a framework for the revision of knowledge in abductive reasoning agents, based on interaction. We address issues such as: how to exploit knowl...
Andrea Bracciali, Paolo Torroni
FAST
2004
14 years 11 months ago
Circus: Opportunistic Block Reordering for Scalable Content Servers
Whole-file transfer is a basic primitive for Internet content dissemination. Content servers are increasingly limited by disk arm movement given the rapid growth in disk density, ...
Stergios V. Anastasiadis, Rajiv Wickremesinghe, Je...