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78
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PSB
2004
14 years 11 months ago
An Evidence Ontology for Use in Pathway/Genome Databases
An important emerging need in Model Organism Databases (MODs) and other bioinformatics databases (DBs) is that of capturing the scientific evidence that supports the information wi...
Peter D. Karp, Suzanne M. Paley, Cynthia J. Kriege...
76
Voted
PSB
2004
14 years 11 months ago
Modeling Cellular Processes with Variational Bayesian Cooperative Vector Quantizer
Gene expression of a cell is controlled by sophisticated cellular processes. The capability of inferring the states of these cellular processes would provide insight into the mech...
Xinghua Lu, Milos Hauskrecht, Roger S. Day
72
Voted
PSB
2003
14 years 11 months ago
Towards Identifying Lateral Gene Transfer Events
This paper is concerned with evaluating the performance of the model and algorithm in [7] for detecting lateral gene transfers events. Using a Poisson process to describe arrival t...
Louigi Addario-Berry, Michael T. Hallett, Jens Lag...
96
Voted
PSB
2003
14 years 11 months ago
MAP: Searching Large Genome Databases
A number of biological applications require comparison of large genome strings. Current techniques suffer from both disk I/O and computational cost because of extensive memory req...
Tamer Kahveci, Ambuj K. Singh
75
Voted
PSB
2004
14 years 11 months ago
Multiplexing Schemes for Generic SNP Genotyping Assays
Association studies in populations relate genomic variation among individuals with medical condition. Key to these studies is the development of efficient and affordable genotypin...
Roded Sharan, Amir Ben-Dor, Zohar Yakhini