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STRINGOLOGY
2004
14 years 11 months ago
A First Approach to Finding Common Motifs With Gaps
Costas S. Iliopoulos, James A. M. McHugh, Pierre P...
85
Voted
STRINGOLOGY
2004
14 years 11 months ago
A Note on Bit-Parallel Alignment Computation
Abstract. The edit distance between strings A and B is defined as the minimum number of edit operations needed in converting A into B or vice versa. Typically the allowed edit oper...
Heikki Hyyrö
86
Voted
STRINGOLOGY
2004
14 years 11 months ago
Conditional Inequalities and the Shortest Common Superstring Problem
We investigate the shortest common superstring problem (SCSSP). As SCSSP is APX-complete it cannot be approximated within an arbitrarily small performance ratio. One heuristic tha...
Uli Laube, Maik Weinard
STRINGOLOGY
2004
14 years 11 months ago
BDD-Based Analysis of Gapped q-Gram Filters
Recently, there has been a surge of interest in gapped q-gram filters for approximate string matching. Important design parameters for filters are for example the value of q, the f...
Marc Fontaine, Stefan Burkhardt, Juha Kärkk&a...
STRINGOLOGY
2004
14 years 11 months ago
Sorting suffixes of two-pattern strings
Recently, several authors presented linear recursive algorithms for sorting suffixes of a string. All these algorithms employ a similar three-step approach, based on an initial di...
Frantisek Franek, William F. Smyth