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BMCBI
2010
109views more  BMCBI 2010»
15 years 28 days ago
FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods
Background: Likelihood (ML)-based phylogenetic inference has become a popular method for estimating the evolutionary relationships among species based on genomic sequence data. Th...
Stephanie Zierke, Jason D. Bakos
78
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BMCBI
2010
99views more  BMCBI 2010»
15 years 28 days ago
Assignment of chromosomal locations for unassigned SNPs/scaffolds based on pair-wise linkage disequilibrium estimates
Background: Recent developments of high-density SNP chips across a number of species require accurate genetic maps. Despite rapid advances in genome sequence assembly and availabi...
Mehar S. Khatkar, Matthew Hobbs, Markus Neuditschk...
82
Voted
CACM
2010
90views more  CACM 2010»
15 years 28 days ago
The Singularity system
Every operating system embodies a collection of design decisions. Many of the decisions behind systems have remained unchanged, even as hardware and software have evolved. Operati...
James R. Larus, Galen C. Hunt
115
Voted
CGF
2010
153views more  CGF 2010»
15 years 28 days ago
Localized Delaunay Refinement for Sampling and Meshing
The technique of Delaunay refinement has been recognized as a versatile tool to generate Delaunay meshes of a variety of geometries. Despite its usefulness, it suffers from one la...
Tamal K. Dey, Joshua A. Levine, A. Slatton
95
Voted
CGF
2010
106views more  CGF 2010»
15 years 28 days ago
Alleviating the Modifiable Areal Unit Problem within Probe-Based Geospatial Analyses
We present a probe-based interface for the exploration of the results of a geospatial simulation of urban growth. Because our interface allows the user great freedom in how they c...
Thomas Butkiewicz, Ross K. Meentemeyer, Douglas A....