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PROCEDIA
2010
140views more  PROCEDIA 2010»
13 years 1 months ago
Theoretical enzyme design using the Kepler scientific workflows on the Grid
One of the greatest challenges in computational chemistry is the design of enzymes to catalyze non-natural chemical reactions. We focus on harnessing the distributed parallel comp...
Jianwu Wang, Prakashan Korambath, Seonah Kim, Scot...
ICWS
2009
IEEE
13 years 4 months ago
A MapReduce-Enabled Scientific Workflow Composition Framework
MapReduce has recently gained a lot of attention as a parallel programming model for scalable data-intensive business and scientific analysis. In order to benefit from this powerf...
Xubo Fei, Shiyong Lu, Cui Lin
SOFTWARE
2008
13 years 7 months ago
Scientific Software as Workflows: From Discovery to Distribution
Scientific workflows
David Woollard, Nenad Medvidovic, Yolanda Gil, Chr...
SERVICES
2010
105views more  SERVICES 2010»
13 years 8 months ago
Scientific Workflow Development Using Both Visual and Script-Based Representation
In this paper we propose to achieve a semantic equivalence between a visual- and a script-based workflow development paradigm. We accomplish this by building a script language whi...
Ketan Maheshwari, Johan Montagnat
EDBTW
2006
Springer
13 years 10 months ago
A Calculus for Propagating Semantic Annotations Through Scientific Workflow Queries
Scientific workflows facilitate automation, reuse, and reproducibility of scientific data management and analysis tasks. Scientific workflows are often modeled as dataflow networks...
Shawn Bowers, Bertram Ludäscher
DILS
2006
Springer
13 years 10 months ago
Collection-Oriented Scientific Workflows for Integrating and Analyzing Biological Data
Steps in scientific workflows often generate collections of results, causing the data flowing through workflows to become increasingly nested. Because conventional workflow compone...
Timothy M. McPhillips, Shawn Bowers, Bertram Lud&a...
ICCS
2007
Springer
13 years 11 months ago
A Dataflow-Oriented Atomicity and Provenance System for Pipelined Scientific Workflows
Scientific workflows have gained great momentum in recent years due to their critical roles in e-Science and cyberinfrastructure applications. However, some tasks of a scientific w...
Liqiang Wang, Shiyong Lu, Xubo Fei, Jeffrey L. Ram
SAG
2004
Springer
14 years 14 days ago
A Framework for the Design and Reuse of Grid Workflows
Grid workflows can be seen as special scientific workflows involving high performance and/or high throughput computational tasks. Much work in grid workflows has focused on improvi...
Ilkay Altintas, Adam Birnbaum, Kim Baldridge, Wibk...
WAIM
2005
Springer
14 years 18 days ago
Using Web Services and Scientific Workflow for Species Distribution Prediction Modeling
Species distribution prediction modeling plays a key role in biodiversity research. We propose to publish both species distribution data and modeling components as Web services and...
Jianting Zhang, Deana Pennington, William Michener
SSDBM
2005
IEEE
99views Database» more  SSDBM 2005»
14 years 21 days ago
Incorporating Semantics in Scientific Workflow Authoring
The tools used to analyze scientific data are often distinct from those used to archive, retrieve, and query data. A scientific workflow environment, however, allows one to seamles...
Chad Berkley, Shawn Bowers, Matthew B. Jones, Bert...