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EWC
2007
60views more  EWC 2007»
13 years 6 months ago
A simulation-based design paradigm for complex cast components
This paper describes and exercises a new design paradigm for cast components. The methodology integrates foundry process simulation, non-destructive evaluation (nde), stress analys...
Stéphane P. A. Bordas, James G. Conley, Bri...
ERCIM
2007
124views more  ERCIM 2007»
13 years 6 months ago
Cancer Treatment Planning with Grid-Based Technology
sented by abstract mathematical structures, and visualization is used to convert these into pictures. At the core of every simulation is a mathematical model that is evaluated by a...
Robert G. Belleman, Michael Scarpa, Bram Stolk
JPDC
2006
81views more  JPDC 2006»
13 years 6 months ago
Implications of virtualization on Grids for high energy physics applications
The simulations used in the field of high energy physics are compute intensive and exhibit a high level of data parallelism. These features make such simulations ideal candidates ...
Laura Gilbert, Jeff Tseng, Rhys Newman, Saeed Iqba...
JCC
2008
76views more  JCC 2008»
13 years 6 months ago
Exploring the conformational space of Vpu from HIV-1: A versatile adaptable protein
Abstract: The dynamic behavior of monomeric Vpu1-32 from HIV-1 in different lipid environments has been studied. The peptide shows highly flexible behavior during the simulations a...
Jens Krüger, Wolfgang B. Fischer
JCC
2008
114views more  JCC 2008»
13 years 6 months ago
Molecular simulation of multistate peptide dynamics: A comparison between microsecond timescale sampling and multiple shorter tr
Abstract: Molecular dynamics simulations of the RN24 peptide, which includes a diverse set of structurally heterogeneous states, are carried out in explicit solvent. Two approaches...
Luca Monticelli, Eric J. Sorin, D. Peter Tieleman,...
JCC
2008
132views more  JCC 2008»
13 years 6 months ago
The implementation of a fast and accurate QM/MM potential method in Amber
Abstract: Version 9 of the Amber simulation programs includes a new semi-empirical hybrid QM/MM functionality. This includes support for implicit solvent (generalized Born) and for...
Ross C. Walker, Michael F. Crowley, David A. Case
INFORMATICALT
2008
120views more  INFORMATICALT 2008»
13 years 6 months ago
Nonlinear Behaviour in the MPI-Parallelised Model of the Rat Somatosensory Cortex
Mammalian brains consisting of up to 1011 neurons belong to group of the most complex systems in the Universe. For years they have been one of the hardest objects of simulation. Th...
Grzegorz M. Wojcik, Wieslaw A. Kaminski
CORR
2010
Springer
91views Education» more  CORR 2010»
13 years 6 months ago
Simulations of Weighted Tree Automata
Simulations of weighted tree automata (wta) are considered. It is shown how such simulations can be decomposed into simpler functional and dual functional simulations also called f...
Zoltán Ésik, Andreas Maletti
BMCBI
2007
88views more  BMCBI 2007»
13 years 6 months ago
Use of DNA melting simulation software for in silico diagnostic assay design: targeting regions with complex melting curves and
Background: DNA melting curve analysis using double-stranded DNA-specific dyes such as SYTO9 produce complex and reproducible melting profiles, resulting in the detection of multi...
John P. Rasmussen, Christopher P. Saint, Paul T. M...
BIOSYSTEMS
2007
111views more  BIOSYSTEMS 2007»
13 years 6 months ago
Event-driven simulation of neural population synchronization facilitated by electrical coupling
Most neural communication and processing tasks are driven by spikes. This has enabled the application of the event-driven simulation schemes. However the simulation of spiking neu...
Richard R. Carrillo, Eduardo Ros, Boris Barbour, C...