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CSB
2005
IEEE
155views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Identifying Orthologs: Cycle Splitting on the Breakpoint Graph
Rogier J. P. van Berlo, Lodewyk F. A. Wessels, S. ...
CSB
2005
IEEE
117views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Protein Structure Prediction Using Physical-Based Global Optimization and Knowledge-Guided Fragment Packing
We describe a new method to predict the tertiary structure of new-fold proteins. Our two-phase approach combines the knowledge-based fragmentpacking with the minimization of a phy...
Jinhui Ding, Elizabeth Eskow, Nelson L. Max, Silvi...
CSB
2005
IEEE
124views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Automated Characterization of cellular migration phenomena
Christian Beaudry, Michael E. Berens, Tarek A. El ...
CSB
2005
IEEE
189views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks
We developed a machine learning system for determining gene functions from heterogeneous sources of data sets using a Weighted Naive Bayesian Network (WNB). The knowledge of gene ...
Xutao Deng, Huimin Geng, Hesham H. Ali
CSB
2005
IEEE
119views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Temperature and Mutation Switches in the Secondary Structure of Small RNAs
Conformational switching in the secondary structure of RNAs has recently attracted considerable attention, fostered by the discovery of ‘riboswitches’ in living organisms. The...
Assaf Avihoo, Danny Barash
CSB
2005
IEEE
202views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Head and Neck Cancer Metastasis Prediction via Artificial Neural Networks
Cancers in head and neck tends to spread to nearby lymph nodes. Lymph nodes trap the spreading tumor cells but then the tumor starts to grow in these nodes and then spread further...
Eveleen Darby, Tezeswari Nettimi, Shilpa Kodali, L...
CSB
2005
IEEE
156views Bioinformatics» more  CSB 2005»
13 years 10 months ago
A Robust Meta-classification Strategy for Cancer Diagnosis from Gene Expression Data
One of the major challenges in cancer diagnosis from microarray data is to develop robust classification models which are independent of the analysis techniques used and can combi...
Gabriela Alexe, Gyan Bhanot, Babu Venkataraghavan,...
CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
13 years 10 months ago
Improving Operon Prediction in E. coli
In bacterium, genes working in the same pathway or interacting with each other are often organized into operons. Currently, the prediction accuracy for operon/boundary gene pairs ...
PhuongAn Dam, Victor Olman, Ying Xu