RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
Abstract. Peptide mass fingerprinting is a technique to identify a protein from its fragment masses obtained by mass spectrometry after enzymatic digestion. Recently, much attentio...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
Understanding how individual proteins are organized into complexes and pathways is a significant current challenge. We introduce new algorithms to infer protein complexes by combin...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
Abstract. Identifying gene functional modules is an important step towards elucidating gene functions at a global scale. In this paper, we introduce a simple method to construct ge...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
Abstract. Mapping intra-cellular signaling networks is a critical step in developing an understanding of and treatments for many devastating diseases. The predominant ways of disco...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
mRNA molecules are folded in the cells and therefore many of their substrings may actually be inaccessible to protein and microRNA binding. The need to apply an accessability crite...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
Abstract. Transcriptional interactions in a cell are modulated by a variety of mechanisms that prevent their representation as pure pairwise interactions between a transcription fa...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
Abstract. Protein motions, ranging from molecular flexibility to largescale conformational change, play an essential role in many biochemical processes. Despite the explosion in ou...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
We have combined four different types of functional genomic data to create high coverage protein interaction networks for 11 microbes. Our integration algorithm naturally handles s...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
Abstract. So far, most methods for identifying sequences under selection based on comparative sequence data have either assumed selectional pressures are the same across all branch...