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We propose a mini-batching scheme for improving the theoretical complexity and practical performance of semi-stochastic gradient descent applied to the problem of minimizing a str...

Jakub Konecný, Jie Liu, Peter Richtá...

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JSTSP
2016

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Segmentation and Track-Analysis in Time-Lapse Imaging of Bacteria

10 years 26 days ago

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—In this work, we have developed tools to analyze prokaryotic cells growing in monolayers in a microﬂuidic device. Individual bacterial cells are identiﬁed using a novel curv...

Sajith Kecheril Sadanandan, Ozden Baltekin, Klas E...

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JSTSP
2016

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Coarse-Graining of Volumes for Modeling of Structure and Dynamics in Electron Microscopy: Algorithm to Automatically Control Acc

10 years 26 days ago

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—Coarse-graining (or granularization) of structures from transmission electron microscopy (EM volumes) has been shown to be useful for a variety of structural analysis applicatio...

Slavica Jonic, Carlos Oscar Sánchez Sorzano

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