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CCGRID
2005
IEEE

A grid-based system for microbial genome comparison and analysis

14 years 3 months ago
A grid-based system for microbial genome comparison and analysis
Genome comparison and analysis can reveal the structures and functions of genome sequences of different species. As more genomes are sequenced, genomic data sources are rapidly increasing such that their analysis is beyond the processing capabilities of most research institutes. The Grid is a powerful solution to support large-scale genomic data processing and genome analysis. This paper presents the Microbase project that is developing a Grid-based system for genome comparison and analysis, and discusses the first implementation of the system (called MicrobaseLite). MicrobaseLite uses a scalable computing environment to support computationally intensive microbial genome comparison and analysis, employing state-of-the-art technologies of Web Services, notification, comparative genomics and parallel computing. Microbase will support not only system-defined genome comparison and analysis but also user-defined, remotely conceived genome analysis.
Yudong Sun, Anil Wipat, Matthew R. Pocock, P. A. L
Added 24 Jun 2010
Updated 24 Jun 2010
Type Conference
Year 2005
Where CCGRID
Authors Yudong Sun, Anil Wipat, Matthew R. Pocock, P. A. Lee, P. Watson, K. Flanagan, J. T. Worthington
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