316 search results - page 20 / 64 » A 3D pattern matching algorithm for DNA sequences |
122
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BMCBI
2004
15 years 1 months ago
2004
Background: Oligonucleotide frequencies were shown to be conserved signatures for bacterial genomes, however, the underlying constraints have yet not been resolved in detail. In t...
119
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SSDBM
2003
IEEE
15 years 7 months ago
2003
IEEE
The growing interest in genomic research has caused an explosive growth in the size of DNA databases making it increasely challenging to perform searches on them. In this paper, w...
BIRD
2008
Springer
15 years 3 months ago
2008
Springer
We study the problem of structured motif search in DNA sequences. This is a fundamental task in bioinformatics which contributes to better understanding of genome characteristics a...
114
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DATE
2008
IEEE
15 years 8 months ago
2008
IEEE
In many applications string pattern matching is one of the most intensive tasks in terms of computation time and memory accesses. Network Intrusion Detection Systems and DNA Seque...
110
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RECOMB
2002
Springer
16 years 2 months ago
2002
Springer
We introduce a model of DNA sequence evolution which can account for biases in mutation rates that depend on the identity of the neighboring bases. An analytic solution for this c...