316 search results - page 2 / 64 » A 3D pattern matching algorithm for DNA sequences |
CSB
2004
IEEE
15 years 1 months ago
2004
IEEE
We propose derivative Boyer-Moore (d-BM), a new compressed pattern matching algorithm in DNA sequences. This algorithm is based on the BoyerMoore method, which is one of the most ...
BMCBI
2004
14 years 9 months ago
2004
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
ISBI
2002
IEEE
15 years 10 months ago
2002
IEEE
We propose an algorithm for the 3-D reconstruction of DNA filaments from a pair of stereo cryo-electron micrographs. The underlying principle is to specify a 3-D model of a filame...
85
Voted
ICIP
2004
IEEE
15 years 11 months ago
2004
IEEE
We introduce a 3-D parametric active contour algorithm for the shape estimation of DNA molecules from stereo cryo-electron micrographs. We consider a 3-D filament (consisting of a...
118
Voted
BIRD
2008
Springer
14 years 11 months ago
2008
Springer
Exact matching of single patterns in DNA and amino acid sequences is studied. We performed an extensive experimental comparison of algorithms presented in the literature. In additi...