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» A Bayesian Approach to Model Checking Biological Systems
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ECBS
2007
IEEE
145views Hardware» more  ECBS 2007»
15 years 8 months ago
Automatic Verification and Performance Analysis of Time-Constrained SysML Activity Diagrams
We present in this paper a new approach for the automatic verification and performance analysis of SysML activity diagrams. Since timeliness is important in the design and analysi...
Yosr Jarraya, Andrei Soeanu, Mourad Debbabi, Fawzi...
CMSB
2011
Springer
14 years 4 months ago
The singular power of the environment on stochastic nonlinear threshold Boolean automata networks
Abstract. This paper tackles theoretically the question of the structural stability of biological regulation networks subjected to the influence of their environment. The model of...
Jacques Demongeot, Sylvain Sené
BMCBI
2005
178views more  BMCBI 2005»
15 years 4 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
ENTCS
2010
133views more  ENTCS 2010»
15 years 4 months ago
Towards Measurable Types for Dynamical Process Modeling Languages
Process modeling languages such as "Dynamical Grammars" are highly expressive in the processes they model using stochastic and deterministic dynamical systems, and can b...
Eric Mjolsness
GECCO
2006
Springer
165views Optimization» more  GECCO 2006»
15 years 7 months ago
Comparing mathematical models on the problem of network inference
In this paper we address the problem of finding gene regulatory networks from experimental DNA microarray data. We focus on the evaluation of the performance of different mathemat...
Christian Spieth, Nadine Hassis, Felix Streichert