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» A Database Platform for Bioinformatics
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113
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SIGMOD
2011
ACM
210views Database» more  SIGMOD 2011»
14 years 3 months ago
A platform for scalable one-pass analytics using MapReduce
Today’s one-pass analytics applications tend to be data-intensive in nature and require the ability to process high volumes of data efficiently. MapReduce is a popular programm...
Boduo Li, Edward Mazur, Yanlei Diao, Andrew McGreg...
98
Voted
DBSEC
2007
104views Database» more  DBSEC 2007»
15 years 2 months ago
New Paradigm of Inference Control with Trusted Computing
Abstract. The database server is a crucial bottleneck in traditional inference control architecture, as it enforces highly computation-intensive auditing for all users who query th...
Yanjiang Yang, Yingjiu Li, Robert H. Deng
111
Voted
P2PKM
2004
15 years 1 months ago
Coordinating Mobile Databases
Abstract. We are interested in the development of a database management layer which is completely portable and, therefore, "pluggable" on top of multiple host platforms. ...
Fausto Giunchiglia, Ilya Zaihrayeu
IPPS
2007
IEEE
15 years 6 months ago
High Performance Database Searching with HMMer on FPGAs
1 Profile Hidden Markov Models (profile HMMs) are used as a popular bioinformatics tool for sensitive database searching, e.g. a set of not annotated protein sequences is compared...
Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt
WAIM
2010
Springer
14 years 11 months ago
HyperGraphDB: A Generalized Graph Database
We present HyperGraphDB, a novel graph database based on generalized hypergraphs where hyperedges can contain other hyperedges. This generalization automatically reifies every ent...
Borislav Iordanov