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BMCBI
2011
14 years 4 months ago
ASPDock: protein-protein docking algorithm using atomic solvation parameters model
Background: Atomic Solvation Parameters (ASP) model has been proven to be a very successful method of calculating the binding free energy of protein complexes. This suggests that ...
Lin Li, Dachuan Guo, Yangyu Huang, Shiyong Liu, Yi...
PPOPP
2006
ACM
15 years 3 months ago
Optimizing irregular shared-memory applications for distributed-memory systems
In prior work, we have proposed techniques to extend the ease of shared-memory parallel programming to distributed-memory platforms by automatic translation of OpenMP programs to ...
Ayon Basumallik, Rudolf Eigenmann
ICS
2001
Tsinghua U.
15 years 2 months ago
Integrating superscalar processor components to implement register caching
A large logical register file is important to allow effective compiler transformations or to provide a windowed space of registers to allow fast function calls. Unfortunately, a l...
Matt Postiff, David Greene, Steven E. Raasch, Trev...
DILS
2009
Springer
15 years 1 months ago
A Visual Interface for on-the-fly Biological Database Integration and Workflow Design Using VizBuilder
Abstract. Data integration plays a major role in modern Life Sciences research primarily because required resources are geographically distributed across continents and experts dep...
Shahriyar Hossain, Hasan M. Jamil
CASES
2006
ACM
15 years 3 months ago
Automated compile-time and run-time techniques to increase usable memory in MMU-less embedded systems
Random access memory (RAM) is tightly-constrained in many embedded systems. This is especially true for the least expensive, lowest-power embedded systems, such as sensor network ...
Lan S. Bai, Lei Yang, Robert P. Dick