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» A Massively Parallel Architecture for Bioinformatics
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IPPS
2002
IEEE
15 years 4 months ago
Portals 3.0: Protocol Building Blocks for Low Overhead Communication
This paper describes the evolution of the Portals message passing architecture and programming interface from its initial development on tightly-coupled massively parallel platfor...
Ron Brightwell, William Lawry, Arthur B. Maccabe, ...
ASAP
2006
IEEE
169views Hardware» more  ASAP 2006»
15 years 5 months ago
A Design Methodology for Hardware Acceleration of Adaptive Filter Algorithms in Image Processing
Massively parallel processor array architectures can be used as hardware accelerators for a plenty of dataflow dominant applications. Bilateral filtering is an example of a stat...
Hritam Dutta, Frank Hannig, Jürgen Teich, Ben...
PCI
2005
Springer
15 years 4 months ago
Initial Experiences Porting a Bioinformatics Application to a Graphics Processor
Bioinformatics applications are one of the most relevant and compute-demanding applications today. While normally these applications are executed on clusters or dedicated parallel ...
Maria Charalambous, Pedro Trancoso, Alexandros Sta...
SIGARCH
2008
144views more  SIGARCH 2008»
14 years 11 months ago
A stream chip-multiprocessor for bioinformatics
- Bioinformatics applications such as gene and protein sequence matching algorithms are characterized by the need to process large amounts of data. While uni-processor performance ...
Ravi Kiran Karanam, Arun Ravindran, Arindam Mukher...
ICGA
1993
75views Optimization» more  ICGA 1993»
15 years 21 days ago
Structure and Performance of Fine-Grain Parallelism in Genetic Search
Within the parallel genetic algorithm framework, there currently exists a growing dichotomy between coarse-pain and fine-grain parallel architectures. This paper attempts to chara...
Shumeet Baluja