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» A New Approach to Protein Identification
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FASE
2008
Springer
15 years 1 months ago
What's in a Feature: A Requirements Engineering Perspective
Abstract. The notion of feature is heavily used in Software Engineering, especially for software product lines. However, this notion appears to be confusing, mixing various aspects...
Andreas Classen, Patrick Heymans, Pierre-Yves Scho...
ISVC
2009
Springer
15 years 6 months ago
Wavelet-Based Representation of Biological Shapes
Modeling, characterization and analysis of biological shapes and forms are important in many computational biology studies. Shape representation challenges span the spectrum from s...
Bin Dong, Yu Mao, Ivo D. Dinov, Zhuowen Tu, Yongga...
IPPS
2009
IEEE
15 years 6 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
GCB
2004
Springer
223views Biometrics» more  GCB 2004»
15 years 3 months ago
PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays
: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs. In this paper, we present a new nonheuristic algorithm, ...
Michael Beckstette, Dirk Strothmann, Robert Homann...
BMCBI
2006
98views more  BMCBI 2006»
14 years 12 months ago
The Secrets of a Functional Synapse - From a Computational and Experimental Viewpoint
Background: Neuronal communication is tightly regulated in time and in space. The neuronal transmission takes place in the nerve terminal, at a specialized structure called the sy...
Michal Linial