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» A Note on Difference Sets
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ALMOB
2006
102views more  ALMOB 2006»
14 years 12 months ago
Mining, compressing and classifying with extensible motifs
Background: Motif patterns of maximal saturation emerged originally in contexts of pattern discovery in biomolecular sequences and have recently proven a valuable notion also in t...
Alberto Apostolico, Matteo Comin, Laxmi Parida
ALMOB
2006
155views more  ALMOB 2006»
14 years 12 months ago
Refining motifs by improving information content scores using neighborhood profile search
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
ENGL
2008
78views more  ENGL 2008»
14 years 12 months ago
Threshold for Positional Weight Matrix
In biological sequence research, the positional weight matrix (PWM) is often used to search for putative transcription factor binding sites. A set of experimentally verified oligon...
Yunlian Pan, Sieu Phan
AML
2006
120views more  AML 2006»
14 years 12 months ago
On the infinite-valued Lukasiewicz logic that preserves degrees of truth
Lukasiewicz's infinite-valued logic is commonly defined as the set of formulas that take the value 1 under all evaluations in the Lukasiewicz algebra on the unit real interva...
Josep Maria Font, Àngel J. Gil, Antoni Torr...
BMCBI
2006
159views more  BMCBI 2006»
14 years 12 months ago
EpiJen: a server for multistep T cell epitope prediction
Background: The main processing pathway for MHC class I ligands involves degradation of proteins by the proteasome, followed by transport of products by the transporter associated...
Irini A. Doytchinova, Pingping Guan, Darren R. Flo...
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