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» A Part-of-Speech-Based Alignment Algorithm
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RECOMB
2009
Springer
16 years 2 months ago
Learning Models for Aligning Protein Sequences with Predicted Secondary Structure
Accurately aligning distant protein sequences is notoriously difficult. A recent approach to improving alignment accuracy is to use additional information such as predicted seconda...
Eagu Kim, Travis J. Wheeler, John D. Kececioglu
ALMOB
2006
106views more  ALMOB 2006»
15 years 2 months ago
Multiple sequence alignment with user-defined anchor points
Background: Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situations, expert knowledge can help to improve the qua...
Burkhard Morgenstern, Sonja J. Prohaska, Dirk P&ou...
COLING
1996
15 years 3 months ago
Bilingual Knowledge Acquisition from Korean-English Parallel Corpus Using Alignment
This paper snggests a method to align Korean-English parallel corpus. '1?he structural dissimilarity between Korean and Indo-European languages requires more flexible measure...
Jung H. Shin, Young S. Han, Key-Sun Choi
CEC
2007
IEEE
15 years 8 months ago
An evolutionary progressive multiple sequence alignment
Abstract This paper presents a new evolutionary method, namely, a Two Phase evolutionary algorithm for multiple sequence alignments. This method is composed of different types of e...
Farhana Naznin, Morikazu Nakamura, Takeo Okazaki, ...
BMCBI
2005
122views more  BMCBI 2005»
15 years 1 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...