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BMCBI
2010
167views more  BMCBI 2010»
14 years 10 months ago
Inference of sparse combinatorial-control networks from gene-expression data: a message passing approach
Background: Transcriptional gene regulation is one of the most important mechanisms in controlling many essential cellular processes, including cell development, cell-cycle contro...
Marc Bailly-Bechet, Alfredo Braunstein, Andrea Pag...
124
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BMCBI
2005
169views more  BMCBI 2005»
14 years 10 months ago
Genetic interaction motif finding by expectation maximization - a novel statistical model for inferring gene modules from synthe
Background: Synthetic lethality experiments identify pairs of genes with complementary function. More direct functional associations (for example greater probability of membership...
Yan Qi 0003, Ping Ye, Joel S. Bader
ICIP
2008
IEEE
15 years 12 months ago
Implicit spatial inference with sparse local features
This paper introduces a novel way to leverage the implicit geometry of sparse local features (e.g. SIFT operator) for the purposes of object detection and segmentation. A two-clas...
Deirdre O'Regan, Anil C. Kokaram
RECOMB
2006
Springer
15 years 10 months ago
Inferring Gene Orders from Gene Maps Using the Breakpoint Distance
Abstract. Preliminary to most comparative genomics studies is the annotation of chromosomes as ordered sequences of genes. Unfortunately, different genetic mapping techniques usual...
Guillaume Blin, Eric Blais, Pierre Guillon, Mathie...
87
Voted
IPPS
2007
IEEE
15 years 4 months ago
RAxML-Cell: Parallel Phylogenetic Tree Inference on the Cell Broadband Engine
Computational phylogeny is a challenging application even for the most powerful supercomputers. It is also an ideal candidate for benchmarking emerging multiprocessor architecture...
Filip Blagojevic, Alexandros Stamatakis, Christos ...