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» A SAT-Based Approach to Multiple Sequence Alignment
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NAR
2008
101views more  NAR 2008»
14 years 10 months ago
RNALogo: a new approach to display structural RNA alignment
Regulatory RNAs play essential roles in many essential biological processes, ranging from gene regulation to protein synthesis. This work presents a web-based tool, RNALogo, to cr...
Tzu-Hao Chang, Jorng-Tzong Horng, Hsien-Da Huang
103
Voted
ACL
2010
14 years 10 months ago
Learning Script Knowledge with Web Experiments
We describe a novel approach to unsupervised learning of the events that make up a script, along with constraints on their temporal ordering. We collect naturallanguage descriptio...
Michaela Regneri, Alexander Koller, Manfred Pinkal
102
Voted
DATAMINE
2006
142views more  DATAMINE 2006»
15 years 11 days ago
Sequential Pattern Mining in Multi-Databases via Multiple Alignment
To efficiently find global patterns from a multi-database, information in each local database must first be mined and summarized at the local level. Then only the summarized infor...
Hye-Chung Kum, Joong Hyuk Chang, Wei Wang 0010
ALMOB
2008
160views more  ALMOB 2008»
15 years 15 days ago
Syntenator: Multiple gene order alignments with a gene-specific scoring function
Background: Identification of homologous regions or conserved syntenies across genomes is one crucial step in comparative genomics. This task is usually performed by genome alignm...
Christian Rödelsperger, Christoph Dieterich
RECOMB
2006
Springer
16 years 20 days ago
Phylogenetic Profiling of Insertions and Deletions in Vertebrate Genomes
Micro-indels are small insertion or deletion events (indels) that occur during genome evolution. The study of micro-indels is important, both in order to better understand the unde...
Sagi Snir, Lior Pachter