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» A Sensitive Sequence Comparison Method
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ESWA
2007
100views more  ESWA 2007»
15 years 1 months ago
Using memetic algorithms with guided local search to solve assembly sequence planning
The goal of assembly planning consists in generating feasible sequences to assemble a product and selecting an efficient assembly sequence from which related constraint factors su...
Hwai-En Tseng, Wen-Pai Wang, Hsun-Yi Shih
RECOMB
1997
Springer
15 years 6 months ago
A branch-and-cut algorithm for multiple sequence alignment
Multiple sequence alignment is an important problem in computational biology. We study the Maximum Trace formulation introduced by Kececioglu [?]. We first phrase the problem in ...
Knut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kur...
BMCBI
2010
95views more  BMCBI 2010»
15 years 2 months ago
Quantifying the relationship between sequence and three-dimensional structure conservation in RNA
Background: In recent years, the number of available RNA structures has rapidly grown reflecting the increased interest on RNA biology. Similarly to the studies carried out two de...
Emidio Capriotti, Marc A. Martí-Renom
BMCBI
2005
148views more  BMCBI 2005»
15 years 1 months ago
NemaFootPrinter: a web based software for the identification of conserved non-coding genome sequence regions between C. elegans
Background: NemaFootPrinter (Nematode Transcription Factor Scan Through Philogenetic Footprinting) is a web-based software for interactive identification of conserved, non-exonic ...
Davide Rambaldi, Alessandro Guffanti, Paolo Morand...
ICIP
2009
IEEE
16 years 3 months ago
New Results On Performance Analysis Of Super-resolution Image Reconstruction
In this paper, we present new results in performance analysis of super-resolution (SR) image reconstruction. We investigate bounds on the improvement in resolution that can be ach...