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» A Stochastic Semantics for BioAmbients
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ICLP
2010
Springer
15 years 3 months ago
A Logical Paradigm for Systems Biology (Invited Talk)
[6]. An SBML model can be interpreted in Biocham at three abstraction levels: • the Boolean semantics (asynchronuous Boolean state transitions on the presence/absence of molecule...
François Fages
IJCAI
2003
15 years 1 months ago
Scenario-based Stochastic Constraint Programming
To model combinatorial decision problems involving uncertainty and probability, we extend the stochastic constraint programming framework proposed in [Walsh, 2002] along a number ...
Suresh Manandhar, Armagan Tarim, Toby Walsh
BIRTHDAY
2009
Springer
14 years 9 months ago
Structural Operational Semantics for Weighted Transition Systems
Weighted transition systems are defined, parametrized by a commutative monoid of weights. These systems are further understood as coalgebras for functors of a specific form. A gene...
Bartek Klin
TCS
2008
14 years 11 months ago
On process rate semantics
We provide translations between process algebra and systems of chemical reactions. We show that the translations preserve discrete-state (stochastic) and continuous-state (concent...
Luca Cardelli
AB
2007
Springer
15 years 5 months ago
A Stochastic Pi Calculus for Concurrent Objects
We present SpiCO, a new modeling and simulation language for systems biology. SpiCO is based on the stochastic π-calculus. It supports higher level modeling via multi-profile con...
Céline Kuttler, Cédric Lhoussaine, J...