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» A Transcriptional Approach to Gene Clustering
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BMCBI
2007
168views more  BMCBI 2007»
14 years 9 months ago
Bayesian model-based inference of transcription factor activity
Background: In many approaches to the inference and modeling of regulatory interactions using microarray data, the expression of the gene coding for the transcription factor is co...
Simon Rogers, Raya Khanin, Mark Girolami
CIKM
2004
Springer
15 years 3 months ago
Mining gene expression datasets using density-based clustering
Given the recent advancement of microarray technologies, we present a density-based clustering approach for the purpose of co-expressed gene cluster identification. The underlyin...
Seokkyung Chung, Jongeun Jun, Dennis McLeod
BIBM
2008
IEEE
212views Bioinformatics» more  BIBM 2008»
15 years 4 months ago
Analysis of Multiplex Gene Expression Maps Obtained by Voxelation
Background: Gene expression signatures in the mammalian brain hold the key to understanding neural development and neurological disease. Researchers have previously used voxelatio...
Li An, Hongbo Xie, Mark H. Chin, Zoran Obradovic, ...
BMCBI
2005
102views more  BMCBI 2005»
14 years 9 months ago
Genome-wide identification of the regulatory targets of a transcription factor using biochemical characterization and computatio
Background: A major challenge in computational genomics is the development of methodologies that allow accurate genome-wide prediction of the regulatory targets of a transcription...
Emmitt R. Jolly, Chen-Shan Chin, Ira Herskowitz, H...
IDA
2008
Springer
14 years 9 months ago
ExpertDiscovery system application for the hierarchical analysis of eukaryotic transcription regulatory regions based on DNA cod
We developed Relational Data Mining approach which allows to overcome essential limitations of the Data Mining and Knowledge Discovery techniques. In the paper the approach was im...
I. V. Khomicheva, Eugenii E. Vityaev, Elena A. Ana...