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BMCBI
2010
131views more  BMCBI 2010»
13 years 6 months ago
A comparison of approximation techniques for variance-based sensitivity analysis of biochemical reaction systems
Background: Sensitivity analysis is an indispensable tool for the analysis of complex systems. In a recent paper, we have introduced a thermodynamically consistent variance-based ...
Hong-Xuan Zhang, John Goutsias
BIOCOMP
2010
13 years 4 months ago
A Model Reduction Technique for Stochastic Biochemical Kinetics
Abstract-- Modeling the intermolecular reactions in a single cell is a critical problem in computational biology. Biochemical reaction systems often involve species in both low and...
Silvana Ilie, Ekaterina Kudashkina
HYBRID
2009
Springer
14 years 28 days ago
Optimal Boundary Control of Convention-Reaction Transport Systems with Binary Control Functions
We investigate a new approach for solving boundary control problems for dynamical systems that are governed by transport equations, when the control function is restricted to binar...
Falk M. Hante, Günter Leugering
CORR
2010
Springer
174views Education» more  CORR 2010»
13 years 6 months ago
Hybrid Numerical Solution of the Chemical Master Equation
We present a numerical approximation technique for the analysis of continuous-time Markov chains that describe networks of biochemical reactions and play an important role in the ...
Thomas A. Henzinger, Maria Mateescu, Linar Mikeev,...
AB
2007
Springer
14 years 10 days ago
Algorithmic Algebraic Model Checking IV: Characterization of Metabolic Networks
A series of papers, all under the title of Algorithmic Algebraic Model Checking (AAMC), has sought to combine techniques from algorithmic algebra, model checking and dynamical syst...
Venkatesh Mysore, Bud Mishra