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GCB
2009
Springer
481views Biometrics» more  GCB 2009»
15 years 11 months ago
CUDA-based Multi-core Implementation of MDS-based Bioinformatics Algorithms
: Solving problems in bioinformatics often needs extensive computational power. Current trends in processor architecture, especially massive multi-core processors for graphic cards...
Thilo Fester, Falk Schreiber, Marc Strickert
IPPS
2006
IEEE
15 years 10 months ago
Parallel implementation of the replica exchange molecular dynamics algorithm on Blue Gene/L
The Replica Exchange method is a popular approach for studying the folding thermodynamics of small to modest size proteins in explicit solvent, since it is easily parallelized. Ho...
Maria Eleftheriou, Aleksandr Rayshubskiy, Jed W. P...
ICCV
2001
IEEE
16 years 6 months ago
Feature Selection from Huge Feature Sets
The number of features that can be computed over an image is, for practical purposes, limitless. Unfortunately, the number of features that can be computed and exploited by most c...
José Bins, Bruce A. Draper
ASPDAC
2007
ACM
112views Hardware» more  ASPDAC 2007»
15 years 8 months ago
Efficient Second-Order Iterative Methods for IR Drop Analysis in Power Grid
Due to the extremely large sizes of power grids, IR drop analysis has become a computationally challenging problem both in terms of runtime and memory usage. It has been shown in [...
Yu Zhong, Martin D. F. Wong
ISCC
2005
IEEE
119views Communications» more  ISCC 2005»
15 years 10 months ago
A Systematic Approach to Building High Performance Software-Based CRC Generators
—A framework for designing a family of novel fast CRC generation algorithms is presented. Our algorithms can ideally read arbitrarily large amounts of data at a time, while optim...
Michael E. Kounavis, Frank L. Berry