154 search results - page 11 / 31 » A polyhedral approach to sequence alignment problems |
ESCIENCE
2006
IEEE
15 years 3 months ago
2006
IEEE
Bioinformatics algorithms such as sequence alignment methods based on profile-HMM (Hidden Markov Model) are popular but CPU-intensive. If large amounts of data are processed, a s...
CORR
2007
Springer
14 years 9 months ago
2007
Springer
Assembling a gene from candidate exons is an important problem in computational biology. Among the most successful approaches to this problem is spliced alignment, proposed by Gelf...
RECOMB
2006
Springer
15 years 10 months ago
2006
Springer
For as long as biologists have been computing alignments of sequences, the question of what values to use for scoring substitutions and gaps has persisted. While some choices for s...
AVSS
2006
IEEE
15 years 3 months ago
2006
IEEE
In this paper we address the spatial activity recognition problem with an algorithm based on Smith-Waterman (SW) local alignment. The proposed SW approach utilises dynamic program...
CDC
2009
IEEE
14 years 7 months ago
2009
IEEE
We consider the problem of controlling a continuous-time linear stochastic system from a specification given as a Linear Temporal Logic (LTL) formula over a set of linear predicate...