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146
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ECCC
2008
168views more  ECCC 2008»
15 years 4 months ago
Algebrization: A New Barrier in Complexity Theory
Any proof of P = NP will have to overcome two barriers: relativization and natural proofs. Yet over the last decade, we have seen circuit lower bounds (for example, that PP does n...
Scott Aaronson, Avi Wigderson
EJC
2008
15 years 4 months ago
Fractional coloring and the odd Hadwiger's conjecture
Gerards and Seymour (see [T.R. Jensen, B. Toft, Graph Coloring Problems, Wiley-Interscience, 1995], page 115) conjectured that if a graph has no odd complete minor of order p, the...
Ken-ichi Kawarabayashi, Bruce A. Reed
ALMOB
2006
155views more  ALMOB 2006»
15 years 4 months ago
Refining motifs by improving information content scores using neighborhood profile search
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
164
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BMCBI
2006
172views more  BMCBI 2006»
15 years 4 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
BMCBI
2006
180views more  BMCBI 2006»
15 years 4 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
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