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ICML
2008
IEEE
16 years 2 months ago
Sequence kernels for predicting protein essentiality
The problem of identifying the minimal gene set required to sustain life is of crucial importance in understanding cellular mechanisms and designing therapeutic drugs. This work d...
Cyril Allauzen, Mehryar Mohri, Ameet Talwalkar
BIRD
2008
Springer
15 years 3 months ago
Efficient Seeding Techniques for Protein Similarity Search
Abstract. We apply the concept of subset seeds proposed in [1] to similarity search in protein sequences. The main question studied is the design of efficient seed alphabets to con...
Mikhail A. Roytberg, Anna Gambin, Laurent No&eacut...
121
Voted
EVOW
2008
Springer
15 years 3 months ago
A Hybrid Random Subspace Classifier Fusion Approach for Protein Mass Spectra Classification
Classifier fusion strategies have shown great potential to enhance the performance of pattern recognition systems. There is an agreement among researchers in classifier combination...
Amin Assareh, Mohammad Hassan Moradi, L. Gwenn Vol...
114
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IJON
2010
199views more  IJON 2010»
14 years 11 months ago
DFS-generated pathways in GA crossover for protein structure prediction
Genetic Algorithms (GAs), as nondeterministic conformational search techniques, are promising for solving protein structure prediction (PSP) problems. The crossover operator of a ...
Tamjidul Hoque, Madhu Chetty, Andrew Lewis, Abdul ...
BMCBI
2006
85views more  BMCBI 2006»
15 years 1 months ago
Identification of physicochemical selective pressure on protein encoding nucleotide sequences
Background: Statistical methods for identifying positively selected sites in protein coding regions are one of the most commonly used tools in evolutionary bioinformatics. However...
Wendy S. W. Wong, Raazesh Sainudiin, Rasmus Nielse...