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PVM
2004
Springer
15 years 3 months ago
A New MPI Implementation for Cray SHMEM
Abstract. Previous implementations of MPICH using the Cray SHMEM interface existed for the Cray T3 series of machines, but these implementations were abandoned after the T3 series ...
Ron Brightwell
BMCBI
2011
14 years 4 months ago
DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI
Background: Next-generation sequencing technologies have led to the high-throughput production of sequence data (reads) at low cost. However, these reads are significantly shorter...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
CLUSTER
2006
IEEE
15 years 3 months ago
Designing High Performance and Scalable MPI Intra-node Communication Support for Clusters
As new processor and memory architectures advance, clusters start to be built from larger SMP systems, which makes MPI intra-node communication a critical issue in high performanc...
Lei Chai, Albert Hartono, Dhabaleswar K. Panda
CLUSTER
2008
IEEE
15 years 4 months ago
OpenMP-centric performance analysis of hybrid applications
—Several performance analysis tools support hybrid applications. Most originated as MPI profiling or tracing tools and OpenMP capabilities were added to extend the performance a...
Karl Fürlinger, Shirley Moore
CLUSTER
2006
IEEE
15 years 3 months ago
A Parallel Algorithm for the Solution of the Deconvolution Problem on Heterogeneous Networks
In this work we present a parallel algorithm for the solution of a least squares problem with structured matrices. This problem arises in many applications mainly related to digit...
Pedro Alonso, Antonio M. Vidal, Alexey L. Lastovet...