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» Aggregation-based model reduction of a Hidden Markov Model
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BMCBI
2010
123views more  BMCBI 2010»
15 years 1 months ago
Predicting conserved protein motifs with Sub-HMMs
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
Kevin Horan, Christian R. Shelton, Thomas Girke
KDD
2008
ACM
121views Data Mining» more  KDD 2008»
16 years 6 months ago
Reconstructing chemical reaction networks: data mining meets system identification
We present an approach to reconstructing chemical reaction networks from time series measurements of the concentrations of the molecules involved. Our solution strategy combines t...
Yong Ju Cho, Naren Ramakrishnan, Yang Cao
CVPR
2007
IEEE
16 years 8 months ago
Belief Propagation in a 3D Spatio-temporal MRF for Moving Object Detection
Previous pixel-level change detection methods either contain a background updating step that is costly for moving cameras (background subtraction) or can not locate object positio...
Zhaozheng Yin, Robert T. Collins
ICML
2008
IEEE
16 years 6 months ago
An HDP-HMM for systems with state persistence
The hierarchical Dirichlet process hidden Markov model (HDP-HMM) is a flexible, nonparametric model which allows state spaces of unknown size to be learned from data. We demonstra...
Emily B. Fox, Erik B. Sudderth, Michael I. Jordan,...
SIGMOD
2001
ACM
145views Database» more  SIGMOD 2001»
16 years 6 months ago
Automatic Segmentation of Text into Structured Records
In this paper we present a method for automatically segmenting unformatted text records into structured elements. Several useful data sources today are human-generated as continuo...
Vinayak R. Borkar, Kaustubh Deshmukh, Sunita Saraw...