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» Algorithms for Finding Gene Clusters
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166
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BMCBI
2006
156views more  BMCBI 2006»
15 years 3 months ago
Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models
Background: Horizontal gene transfer (HGT) is considered a strong evolutionary force shaping the content of microbial genomes in a substantial manner. It is the difference in spee...
Stephan Waack, Oliver Keller, Roman Asper, Thomas ...
150
Voted
ALMOB
2006
109views more  ALMOB 2006»
15 years 3 months ago
A novel functional module detection algorithm for protein-protein interaction networks
Background: The sparse connectivity of protein-protein interaction data sets makes identification of functional modules challenging. The purpose of this study is to critically eva...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
BMCBI
2007
186views more  BMCBI 2007»
15 years 3 months ago
Modeling human cancer-related regulatory modules by GA-RNN hybrid algorithms
Background: Modeling cancer-related regulatory modules from gene expression profiling of cancer tissues is expected to contribute to our understanding of cancer biology as well as...
Jung-Hsien Chiang, Shih-Yi Chao
ESANN
2008
15 years 4 months ago
A method for robust variable selection with significance assessment
Our goal is proposing an unbiased framework for gene expression analysis based on variable selection combined with a significance assessment step. We start by discussing the need ...
Annalisa Barla, Sofia Mosci, Lorenzo Rosasco, Ales...
WWW
2008
ACM
16 years 4 months ago
As we may perceive: finding the boundaries of compound documents on the web
This paper considers the problem of identifying on the Web compound documents (cDocs) ? groups of web pages that in aggregate constitute semantically coherent information entities...
Pavel Dmitriev