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» Algorithms for Finding Gene Clusters
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124
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BMCBI
2007
152views more  BMCBI 2007»
15 years 3 months ago
Bioinformatic identification of novel putative photoreceptor specific cis-elements
Background: Cell specific gene expression is largely regulated by different combinations of transcription factors that bind cis-elements in the upstream promoter sequence. However...
Charles G. Danko, Vera A. McIlvain, Maochun Qin, B...
170
Voted
CPM
2005
Springer
109views Combinatorics» more  CPM 2005»
15 years 9 months ago
Using PQ Trees for Comparative Genomics
Permutations on strings representing gene clusters on genomes have been studied earlier in [18, 14, 3, 12, 17] and the idea of a maximal permutation pattern was introduced in [12]....
Gad M. Landau, Laxmi Parida, Oren Weimann
166
Voted
ECML
2005
Springer
15 years 5 months ago
Clustering and Metaclustering with Nonnegative Matrix Decompositions
Although very widely used in unsupervised data mining, most clustering methods are affected by the instability of the resulting clusters w.r.t. the initialization of the algorithm ...
Liviu Badea
KDD
2008
ACM
206views Data Mining» more  KDD 2008»
16 years 3 months ago
Identifying biologically relevant genes via multiple heterogeneous data sources
Selection of genes that are differentially expressed and critical to a particular biological process has been a major challenge in post-array analysis. Recent development in bioin...
Zheng Zhao, Jiangxin Wang, Huan Liu, Jieping Ye, Y...
229
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ICDE
2007
IEEE
165views Database» more  ICDE 2007»
16 years 4 months ago
Distance Based Subspace Clustering with Flexible Dimension Partitioning
Traditional similarity or distance measurements usually become meaningless when the dimensions of the datasets increase, which has detrimental effects on clustering performance. I...
Guimei Liu, Jinyan Li, Kelvin Sim, Limsoon Wong