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» Aligning Alignments
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AMTA
2004
Springer
15 years 5 months ago
: Improving Domain-Specific Word Alignment with a General Bilingual Corpus
In conventional word alignment methods, some employ statistical models or statistical measures, which need large-scale bilingual sentencealigned training corpora. Others employ dic...
Hua Wu, Haifeng Wang
BMCBI
2008
140views more  BMCBI 2008»
14 years 12 months ago
Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
Kazutaka Katoh, Hiroyuki Toh
RECOMB
2004
Springer
16 years 2 days ago
Multiple Genome Alignment by Clustering Pairwise Matches
We have developed a multiple genome alignment algorithm by using a sequence clustering algorithm to combine local pairwise genome sequence matches produced by pairwise genome align...
Jeong-Hyeon Choi, Kwangmin Choi, Hwan-Gue Cho, Sun...
BMCBI
2007
142views more  BMCBI 2007»
14 years 11 months ago
Predicting and improving the protein sequence alignment quality by support vector regression
Background: For successful protein structure prediction by comparative modeling, in addition to identifying a good template protein with known structure, obtaining an accurate seq...
Minho Lee, Chan-seok Jeong, Dongsup Kim
ALMOB
2006
106views more  ALMOB 2006»
14 years 12 months ago
Multiple sequence alignment with user-defined anchor points
Background: Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situations, expert knowledge can help to improve the qua...
Burkhard Morgenstern, Sonja J. Prohaska, Dirk P&ou...