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FLAIRS
2007
15 years 1 months ago
Temporal Networks with Alternatives: Complexity and Model
Temporal Networks play an important role in solving planning problems and they are also used, though not as frequently, when solving scheduling problems. In this paper we propose ...
Roman Barták, Ondrej Cepek
116
Voted
FDL
2007
IEEE
15 years 5 months ago
Modelling Alternatives for Cycle Approximate Bus TLMs
Transaction level models (TLMs) can be constructed at t levels of abstraction, denoted as untimed (UT), cycle-approximate (CX), and cycle accurate (CA) in this paper. The choice o...
Martin Radetzki, Rauf Salimi Khaligh
97
Voted
ALMOB
2006
155views more  ALMOB 2006»
14 years 11 months ago
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Jonathan E. Allen, Steven L. Salzberg
BMCBI
2006
165views more  BMCBI 2006»
14 years 11 months ago
Improving the quality of protein structure models by selecting from alignment alternatives
Background: In the area of protein structure prediction, recently a lot of effort has gone into the development of Model Quality Assessment Programs (MQAPs). MQAPs distinguish hig...
Ingolf Sommer, Stefano Toppo, Oliver Sander, Thoma...
117
Voted
CEC
2011
IEEE
13 years 10 months ago
Comparing alternative energy functions for the HP model of protein structure prediction
Abstract—Protein structure prediction is the problem of finding the functional conformation of a protein given only its amino uence. The HP lattice model is an abstract formulat...
Mario Garza-Fabre, Eduardo Rodriguez-Tello, Gregor...