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BMCBI
2006
84views more  BMCBI 2006»
14 years 9 months ago
Inferring topology from clustering coefficients in protein-protein interaction networks
Background: Although protein-protein interaction networks determined with high-throughput methods are incomplete, they are commonly used to infer the topology of the complete inte...
Caroline C. Friedel, Ralf Zimmer
IPPS
2005
IEEE
15 years 3 months ago
Message Passing for Linux Clusters with Gigabit Ethernet Mesh Connections
Multiple copper-based commodity Gigabit Ethernet (GigE) interconnects (adapters) on a single host can lead to Linux clusters with mesh/torus connections without using expensive sw...
Jie Chen, William A. Watson III, Robert Edwards, W...
92
Voted
IPPS
2008
IEEE
15 years 3 months ago
Outlier detection in performance data of parallel applications
— When an adaptive software component is employed to select the best-performing implementation for a communication operation at runtime, the correctness of the decision taken str...
Katharina Benkert, Edgar Gabriel, Michael M. Resch
78
Voted
MSS
2003
IEEE
76views Hardware» more  MSS 2003»
15 years 2 months ago
A Scalable Architecture for Clustered Network Attached Storage
Network attached storage systems must provide highly available access to data while maintaining high performance, easy management, and maximum scalability. In this paper, we descr...
Jonathan D. Bright, John A. Chandy
JCC
2007
121views more  JCC 2007»
14 years 9 months ago
Speeding up parallel GROMACS on high-latency networks
: We investigate the parallel scaling of the GROMACS molecular dynamics code on Ethernet Beowulf clusters and what prerequisites are necessary for decent scaling even on such clust...
Carsten Kutzner, David van der Spoel, Martin Fechn...