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BMCBI
2006
166views more  BMCBI 2006»
15 years 1 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
BMCBI
2010
143views more  BMCBI 2010»
15 years 1 months ago
Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images
Background: Several algorithms have been proposed for detecting fluorescently labeled subcellular objects in microscope images. Many of these algorithms have been designed for spe...
Pekka Ruusuvuori, Tarmo Äijö, Sharif Cho...
COMPLEX
2009
Springer
15 years 8 months ago
Comparing Networks from a Data Analysis Perspective
To probe network characteristics, two predominant ways of network comparison are global property statistics and subgraph enumeration. However, they suffer from limited information...
Wei Li, Jing-Yu Yang
BMCBI
2005
198views more  BMCBI 2005»
15 years 1 months ago
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
ISCI
2008
102views more  ISCI 2008»
15 years 1 months ago
Random walk biclustering for microarray data
A biclustering algorithm, based on a greedy technique and enriched with a local search strategy to escape poor local minima, is proposed. The algorithm starts with an initial rand...
Fabrizio Angiulli, Eugenio Cesario, Clara Pizzuti