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123
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BMCBI
2010
135views more  BMCBI 2010»
15 years 2 months ago
Lists2Networks: Integrated analysis of gene/protein lists
Background: Systems biologists are faced with the difficultly of analyzing results from large-scale studies that profile the activity of many genes, RNAs and proteins, applied in ...
Alexander Lachmann, Avi Ma'ayan
129
Voted
BMCBI
2008
110views more  BMCBI 2008»
15 years 2 months ago
Methylation Linear Discriminant Analysis (MLDA) for identifying differentially methylated CpG islands
Background: Hypermethylation of promoter CpG islands is strongly correlated to transcriptional gene silencing and epigenetic maintenance of the silenced state. As well as its role...
Wei Dai, Jens M. Teodoridis, Janet Graham, Constan...
BMCBI
2007
120views more  BMCBI 2007»
15 years 2 months ago
Recognition of interferon-inducible sites, promoters, and enhancers
Background: Computational analysis of gene regulatory regions is important for prediction of functions of many uncharacterized genes. With this in mind, search of the target genes...
Elena A. Ananko, Yury V. Kondrakhin, Tatyana I. Me...
ICLP
2003
Springer
15 years 7 months ago
Termination Analysis with Types Is More Accurate
Abstract. In this paper we show how we can use size and groundness analyses lifted to regular and (polymorphic) Hindley/Milner typed programs to determine more accurate termination...
Vitaly Lagoon, Frédéric Mesnard, Pet...
126
Voted
IPPS
2007
IEEE
15 years 8 months ago
Scheduling in the Z-Polyhedral Model
The polyhedral model is extensively used for analyses and transformations of regular loop programs, one of the most important being automatic parallelization. The model, however, ...
Gautam Gupta, DaeGon Kim, Sanjay V. Rajopadhye