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BMCBI
2010
176views more  BMCBI 2010»
14 years 11 months ago
Reverse engineering gene regulatory network from microarray data using linear time-variant model
nd: Gene regulatory network is an abstract mapping of gene regulations in living cells that can help to predict the system behavior of living organisms. Such prediction capability...
Mitra Kabir, Nasimul Noman, Hitoshi Iba
BMCBI
2010
135views more  BMCBI 2010»
14 years 11 months ago
A classification approach for genotyping viral sequences based on multidimensional scaling and linear discriminant analysis
Background: Accurate classification into genotypes is critical in understanding evolution of divergent viruses. Here we report a new approach, MuLDAS, which classifies a query seq...
Ji Woong Kim, Yongju Ahn, Kichan Lee, Sung-Hee Par...
BMCBI
2007
173views more  BMCBI 2007»
14 years 11 months ago
Predicting state transitions in the transcriptome and metabolome using a linear dynamical system model
Background: Modelling of time series data should not be an approximation of input data profiles, but rather be able to detect and evaluate dynamical changes in the time series dat...
Ryoko Morioka, Shigehiko Kanaya, Masami Y. Hirai, ...
BMCBI
2006
118views more  BMCBI 2006»
14 years 11 months ago
Identification of gene expression patterns using planned linear contrasts
Background: In gene networks, the timing of significant changes in the expression level of each gene may be the most critical information in time course expression profiles. With ...
Hao Li, Constance L. Wood, Yushu Liu, Thomas V. Ge...
PR
2008
161views more  PR 2008»
14 years 11 months ago
A study on three linear discriminant analysis based methods in small sample size problem
In this paper, we make a study on three Linear Discriminant Analysis (LDA) based methods: Regularized Discriminant Analysis (RDA), Discriminant Common Vectors (DCV) and Maximal Ma...
Jun Liu, Songcan Chen, Xiaoyang Tan