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BMCBI
2006
169views more  BMCBI 2006»
14 years 9 months ago
Finding biological process modifications in cancer tissues by mining gene expression correlations
Background: Through the use of DNA microarrays it is now possible to obtain quantitative measurements of the expression of thousands of genes from a biological sample. This techno...
Giacomo Gamberoni, Sergio Storari, Stefano Volinia
APSCC
2009
IEEE
15 years 4 months ago
On analyzing and specifying concerns for data as a service
—Providing data as a service has not only fostered the access to data from anywhere at anytime but also reduced the cost of investment. However, data is often associated with var...
Hong Linh Truong, Schahram Dustdar
BMCBI
2010
127views more  BMCBI 2010»
14 years 9 months ago
SplicerAV: a tool for mining microarray expression data for changes in RNA processing
Background: Over the past two decades more than fifty thousand unique clinical and biological samples have been assayed using the Affymetrix HG-U133 and HG-U95 GeneChip microarray...
Timothy J. Robinson, Michaela A. Dinan, Mark Dewhi...
ICPR
2008
IEEE
15 years 4 months ago
A fuzzy c-means algorithm using a correlation metrics and gene ontology
A fuzzy c-means algorithm was adapted for analyzing microarray data. The adaptation consisted of initialization of fuzzy centroids using gene ontology information and the use of P...
Mingrui Zhang, Terry M. Therneau, Michael A. McKen...
JMLR
2008
117views more  JMLR 2008»
14 years 9 months ago
Closed Sets for Labeled Data
Closed sets have been proven successful in the context of compacted data representation for association rule learning. However, their use is mainly descriptive, dealing only with ...
Gemma C. Garriga, Petra Kralj, Nada Lavrac