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ESA
2008
Springer
115views Algorithms» more  ESA 2008»
15 years 8 months ago
Deterministic Sampling Algorithms for Network Design
For several NP-hard network design problems, the best known approximation algorithms are remarkably simple randomized algorithms called Sample-Augment algorithms in [11]. The algor...
Anke van Zuylen
BMCBI
2010
158views more  BMCBI 2010»
15 years 6 months ago
Validation of differential gene expression algorithms: Application comparing fold-change estimation to hypothesis testing
Background: Sustained research on the problem of determining which genes are differentially expressed on the basis of microarray data has yielded a plethora of statistical algorit...
Corey M. Yanofsky, David R. Bickel
JCB
2007
92views more  JCB 2007»
15 years 6 months ago
Neighbor Joining Algorithms for Inferring Phylogenies via LCA Distances
Reconstructing phylogenetic trees efficiently and accurately from distance estimates is an ongoing challenge in computational biology from both practical and theoretical consider...
Ilan Gronau, Shlomo Moran
ICALP
2004
Springer
15 years 11 months ago
A Faster Algorithm for Minimum Cycle Basis of Graphs
Abstract. In this paper we consider the problem of computing a minimum cycle basis in a graph G with m edges and n vertices. The edges of G have non-negative weights on them. The p...
Telikepalli Kavitha, Kurt Mehlhorn, Dimitrios Mich...
BMCBI
2006
101views more  BMCBI 2006»
15 years 6 months ago
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms
Background: The development of algorithms to infer the structure of gene regulatory networks based on expression data is an important subject in bioinformatics research. Validatio...
Tim Van den Bulcke, Koen Van Leemput, Bart Naudts,...