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» Automated Detection of Design Patterns
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BMCBI
2008
118views more  BMCBI 2008»
14 years 12 months ago
Kismeth: Analyzer of plant methylation states through bisulfite sequencing
Background: There is great interest in probing the temporal and spatial patterns of cytosine methylation states in genomes of a variety of organisms. It is hoped that this will sh...
Eyal Gruntman, Yijun Qi, R. Keith Slotkin, Ted Roe...
BMCBI
2007
139views more  BMCBI 2007»
14 years 12 months ago
XSTREAM: A practical algorithm for identification and architecture modeling of tandem repeats in protein sequences
Background: Biological sequence repeats arranged in tandem patterns are widespread in DNA and proteins. While many software tools have been designed to detect DNA tandem repeats (...
Aaron M. Newman, James B. Cooper
ISCC
2005
IEEE
107views Communications» more  ISCC 2005»
15 years 5 months ago
FTSE: The FNP-Like TCAM Searching Engine
As the Internet grows at a very rapid pace, so does the incidence of attack events and documented unlawful intrusions. The Network Intrusion Detection Systems (NIDSes) are designe...
Rong-Tai Liu, Chia-Nan Kao, Hung-Shen Wu, Ming-Cha...
CCS
2009
ACM
15 years 6 months ago
Keep your friends close: the necessity for updating an anomaly sensor with legitimate environment changes
Large-scale distributed systems have dense, complex code-bases that are assumed to perform multiple and inter-dependent tasks while user interaction is present. The way users inte...
Angelos Stavrou, Gabriela F. Cretu-Ciocarlie, Mich...
INFOCOM
2009
IEEE
15 years 6 months ago
TCP/IP Timing Channels: Theory to Implementation
—There has been significant recent interest in covert communication using timing channels. In network timing channels, information is leaked by controlling the time between tran...
Sarah H. Sellke, Chih-Chun Wang, Saurabh Bagchi, N...