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87
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CSB
2005
IEEE
168views Bioinformatics» more  CSB 2005»
15 years 3 months ago
cis-Regulatory Element Prediction in Mammalian Genomes
The identification of cis-regulatory elements and modules is an important step in understanding the regulation of genes. We have developed a pipeline capable of running multiple m...
Asim S. Siddiqui, Gordon Robertson, Misha Bilenky,...
94
Voted
BMCBI
2007
147views more  BMCBI 2007»
14 years 10 months ago
Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes
Background: Computational prediction methods are currently used to identify genes in prokaryote genomes. However, identification of the correct translation initiation sites remain...
Yuko Makita, Michiel J. L. de Hoon, Antoine Danchi...
80
Voted
CICLING
2007
Springer
15 years 4 months ago
Dependency Analysis and CBR to Bridge the Generation Gap in Template-Based NLG
The present paper describes how dependency analysis can be used to automatically extract from a corpus a set of cases - and an accompanying vocabulary - which enable a template-bas...
Virginia Francisco, Raquel Hervás, Pablo Ge...
COR
2000
129views more  COR 2000»
14 years 10 months ago
Heuristics for the multi-vehicle covering tour problem
The multi-vehicle covering tour problem is de"ned on a graph G"(<6=, E), where = is a set of vertices that must collectively be covered by up to m vehicles. The probl...
Mondher Hachicha, M. John Hodgson, Gilbert Laporte...
114
Voted
IMSCCS
2006
IEEE
15 years 4 months ago
Combining Comparative Genomics with de novo Motif Discovery to Identify Human Transcription Factor DNA-Binding Motifs
Background: As more and more genomes are sequenced, comparative genomics approaches provide a methodology for identifying conserved regulatory elements that may be involved in gen...
Linyong Mao, W. Jim Zheng