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BIOCOMP
2008
15 years 4 months ago
Incomparability of Results Between Phylogenetic Search Programs
Kenneth Sundberg, Hyrum Carroll, Quinn Snell, Mark...
160
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ALMOB
2006
110views more  ALMOB 2006»
15 years 3 months ago
New journal: Algorithms for Molecular Biology
This editorial announces Algorithms for Molecular Biology, a new online open access journal published by BioMed Central. By launching the first open access journal on algorithmic ...
Burkhard Morgenstern, Peter F. Stadler
BIOINFORMATICS
2006
82views more  BIOINFORMATICS 2006»
15 years 3 months ago
ZooDDD: a cross-species database for digital differential display analysis
SUMMARY: In this paper, we combined EST information from the UniGene database and orthologous relationships from the Ensembl database to construct a ZooDDD database. The primary f...
Yun-Ching Chen, Chung-Der Hsiao, Wen-Dar Lin, Chun...
119
Voted
BIOINFORMATICS
2006
130views more  BIOINFORMATICS 2006»
15 years 3 months ago
Memory efficient folding algorithms for circular RNA secondary structures
A small class of RNA molecules, in particular the tiny genomes of viroids, are circular. Yet most structure prediction algorithms handle only linear RNAs. The most straightforward ...
Ivo L. Hofacker, Peter F. Stadler
127
Voted
BIOINFORMATICS
2006
89views more  BIOINFORMATICS 2006»
15 years 3 months ago
Maximum significance clustering of oligonucleotide microarrays
Affymetrix high-density oligonucleotide microarrays measure expression of DNA transcripts using probesets, i.e. multiple probes per transcript. Usually, these multiple measurement...
Dick de Ridder, Frank J. T. Staal, Jacques J. M. v...