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BIRD
2008
Springer
113views Bioinformatics» more  BIRD 2008»
15 years 7 months ago
Matching Spatial Regions with Combinations of Interacting Gene Expression Patterns
The Edinburgh Mouse Atlas aims to capture in-situ gene expression patterns in a common spatial framework. In this study, we construct a grammar to define spatial regions by combina...
Jano I. van Hemert, Richard A. Baldock
BIRD
2008
Springer
163views Bioinformatics» more  BIRD 2008»
15 years 7 months ago
Multi-functional Protein Clustering in PPI Networks
Abstract. Protein-Protein Interaction (PPI) networks contain valuable information for the isolation of groups of proteins that participate in the same biological function. Many pro...
Clara Pizzuti, Simona E. Rombo
BIRD
2008
Springer
159views Bioinformatics» more  BIRD 2008»
15 years 7 months ago
Exploration of Evolutionary Relations between Protein Structures
Abstract. We describe a new method for the exploration of evolutionary relations between protein structures. The approach is based on the ESSM algorithm for detecting structural mu...
Natalja Kurbatova, Juris Viksna
CSB
2005
IEEE
132views Bioinformatics» more  CSB 2005»
15 years 7 months ago
A Fast Shotgun Assembly Heuristic
Genome sequencing opened a new era in genetics allowing the study of genomes at the nucleotide level. However, the chosen method of sequencing produced large numbers of nucleotide...
Christopher Wilks, Sami Khuri
DNA
2006
Springer
143views Bioinformatics» more  DNA 2006»
15 years 7 months ago
A Framework for Modeling DNA Based Molecular Systems
Recent successes in building large scale DNA nanostructures and in constructing DNA nanomechanical devices have inspired scientists to design more complex nanoscale systems. The de...
Sudheer Sahu, Bei Wang, John H. Reif