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BIB
2010
103views more  BIB 2010»
15 years 24 days ago
Challenges of sequencing human genomes
Massively parallel sequencing technologies continue to alter the study of human genetics. As the cost of sequencing declines, next-generation sequencing (NGS) instruments and data...
Daniel C. Koboldt, Li Ding, Elaine R. Mardis, Rich...
CLOUDCOM
2010
Springer
15 years 23 days ago
Voronoi-Based Geospatial Query Processing with MapReduce
Geospatial queries (GQ) have been used in a wide variety of applications such as decision support systems, profile-based marketing, bioinformatics and GIS. Most of the existing qu...
Afsin Akdogan, Ugur Demiryurek, Farnoush Banaei Ka...
IJKDB
2010
141views more  IJKDB 2010»
15 years 19 days ago
Mining Frequent Boolean Expressions: Application to Gene Expression and Regulatory Modeling
Regulatory network analysis and other bioinformatics tasks require the ability to induce and represent arbitrary boolean expressions from data sources. We introduce a novel framew...
Mohammed Javeed Zaki, Naren Ramakrishnan, Lizhuang...
CORR
2011
Springer
181views Education» more  CORR 2011»
14 years 10 months ago
Compressed String Dictionaries
The problem of storing a set of strings – a string dictionary – in compact form appears naturally in many cases. While classically it has represented a small part of the whole ...
Nieves R. Brisaboa, Rodrigo Cánovas, Miguel...
BCB
2010
213views Bioinformatics» more  BCB 2010»
14 years 10 months ago
Markov clustering of protein interaction networks with improved balance and scalability
Markov Clustering (MCL) is a popular algorithm for clustering networks in bioinformatics such as protein-protein interaction networks and protein similarity networks. An important...
Venu Satuluri, Srinivasan Parthasarathy, Duygu Uca...